CALHM6-AS1

Across TCGA patient cohorts, CALHM6-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,005 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CALHM6-AS1-associated proteins across cancer lineages are MT2A, SKAP2, and MTERF3. Each is linked with CALHM6-AS1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CALHM6-AS1-to-partner and partner-to-CALHM6-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CALHM6-AS1 versus MT2A in LSCC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CALHM6-AS1→partner) and Y-score (partner→CALHM6-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MT2A →	+0.966	+0.310	<.001	<.001	3	4
GBM	SKAP2 →	+0.532	+0.260	.005	.009	3	4
OV	MTERF3 →	-0.371	-0.149	.001	<.001	3	3
HNSC	MYO9B →	+0.176	+0.503	<.001	<.001	3	3
HNSC	MYO9B_S1290 →	+0.262	+0.290	.001	.008	3	3
LSCC	P4HA2 →	+0.502	+0.288	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,005 associations by consensus.

CALHM6-AS1 vs MT2A — LSCC

Explore this scatter interactively →