CALB2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALB2 mutation is significantly associated with the total protein of many other genes, with 11 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CALB2-associated genes across cancer lineages are 4E-BP1_pT70, JNK2, and Ku80. Each is linked with CALB2 in more than 2 cancer types. Because this analysis shows association rather than direction, both CALB2-to-partner and partner-to-CALB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 4E-BP1_pT70 grouped by CALB2-low versus CALB2-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALB2→partner) and Y-score (partner→CALB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCM4E-BP1_pT70 →+0.242+2.476.005.01033
UCECJNK2 →+0.225+2.817.039.03631
UCECKu80 →+0.263+2.817.042.03631
UCECBRD4 →+0.304+3.007.049.01931
SKCMSmac →+0.361+2.476.005.01031
SKCMTIGAR →+0.148+2.820.016.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

4E-BP1_pT70 by CALB2 expression — SKCM

Box plot of 4E-BP1_pT70 in CALB2-low vs CALB2-high samples in SKCM.

Explore this box plot interactively →

Exploration