CACNA1C-IT3

associated omics data
CACNA1C intronic transcript 3Genealiases: []

Q-omics provides the consensus-scored CACNA1C-IT3 profile across patient tissues and cancer cell-line models. CACNA1C-IT3 expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in LIHC. Among the 18 cancer types available for tumor–normal comparison, CACNA1C-IT3 is differentially expressed in 1, with the highest sampling consensus in HNSC. Additionally, CACNA1C-IT3 RNA expression shows 15,903 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight LIHC, HNSC, and LSCC as cancer lineages where CACNA1C-IT3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CACNA1C-IT3 survival associations across molecular data types. CACNA1C-IT3 RNA expression shows survival associations in the most cancer types (14). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CACNA1C-IT3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14LIHC (99)view →
This table ranks reproducible CACNA1C-IT3 RNA expression–survival associations across cancer types. High CACNA1C-IT3 expression shows unfavorable associations in LIHC, SKCM, BLCA, THCA and ACC, but favorable associations in LAML. The LIHC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify LIHC as the clearest survival context for CACNA1C-IT3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LIHCOSTertileII,III,IV0.2230.648<.00199view →
SKCMOSTertileIII,IV0.1100.414<.00160view →
BLCADFSTertileIV0.1680.489.00354view →
THCADFSTertileII,III,IV0.1670.718<.00154view →
LAMLDFSTertileAll0.7060.462<.00150view →
ACCOSTertileAll0.5610.829.00930view →
Pink = unfavorable, green = favorable. all 14 lineages →

CACNA1C-IT3-LIHC (OS)

Kaplan–Meier survival curve for CACNA1C-IT3 RNA expression in LIHC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes CACNA1C-IT3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 1. The strongest signals are observed in HNSC for RNA.
CACNA1C-IT3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot1HNSC (2)view →
This table ranks reproducible tumor–normal expression differences for CACNA1C-IT3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CACNA1C-IT3 shows higher tumor expression in HNSC. The HNSC box plot shows higher CACNA1C-IT3 RNA expression in tumor versus normal tissue (log2 FC = +0.051, t-test p = .035).
LineageGenderStageFold-changepSampling consensus
HNSCAllIV+0.051.0352view →
Green = repressed in tumor. all 1 lineages →

CACNA1C-IT3-HNSC

Tumor-vs-normal expression box plot for CACNA1C-IT3 in HNSC.

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Cross-omics associations

This table shows molecular features associated with CACNA1C-IT3 in patient tissues and cancer cell lines. In patient samples, CACNA1C-IT3 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)15,903LSCC (6763)view →
Function (RNA)6,311STAD (4774)view →