C3orf56

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C3orf56 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible C3orf56-associated genes across cancer lineages are TEX13A, CLRN1, and POTED. Each is linked with C3orf56 in more than 1 cancer types. Because this analysis shows association rather than direction, both C3orf56-to-partner and partner-to-C3orf56 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C3orf56→partner) and Y-score (partner→C3orf56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaTEX13A →+0.036+5.643<.001.00232
BLOOD_LymphomaCLRN1 →+0.012+4.867<.001.00931
BLOOD_LymphomaPOTED →+1.083+4.867<.001.00931
BLOOD_LymphomaOR10H5 →+0.119+5.209<.001.00531
BLOOD_LymphomaMRGPRE →+0.019+5.209<.001.00531
BLOOD_LymphomaGAGE12D →+0.462+5.643<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

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