C1S

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C1S protein abundance is significantly associated with the RNA expression of many other genes, with 17,277 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C1S-associated genes across cancer lineages are SERPINE1, GFPT2, and ADAMTS12. Each is linked with C1S in more than 9 cancer types. Because this analysis shows association rather than direction, both C1S-to-partner and partner-to-C1S results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C1S versus SERPINE1 in GBM, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1S→partner) and Y-score (partner→C1S) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSERPINE1 →+2.180+0.628<.001<.001310
COADGFPT2 →+1.223+0.492<.001<.001310
OVADAMTS12 →+1.591+0.729<.001<.001310
OVCOLEC12 →+1.076+0.582<.001<.001310
OVITGA5 →+1.395+0.837<.001<.001310
OVCOL6A3 →+1.773+0.775<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,277 associations by consensus.

C1S vs SERPINE1 — GBM

Per-sample scatter of C1S vs SERPINE1 in GBM (Pearson r = 0.46).

Explore this scatter interactively →

Exploration