C1QTNF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C1QTNF1 protein abundance is significantly associated with the RNA expression of many other genes, with 1,056 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C1QTNF1-associated genes across cancer lineages are GGT1, C14orf93, and ARHGAP5. Each is linked with C1QTNF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both C1QTNF1-to-partner and partner-to-C1QTNF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C1QTNF1 versus GGT1 in GBM, with a Pearson correlation of -0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1QTNF1→partner) and Y-score (partner→C1QTNF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGGT1 →-0.324-1.128.008.00831
GBMC14orf93 →-0.985-1.407<.001<.00131
GBMARHGAP5 →-0.624-0.931.009.00231
GBMDCAF11 →-0.494-1.207.001.00431
GBMREC8 →-1.144-1.225.002.00231
GBMMMP9 →+2.918+1.008.002.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,056 associations by consensus.

C1QTNF1 vs GGT1 — GBM

Per-sample scatter of C1QTNF1 vs GGT1 in GBM (Pearson r = -0.57).

Explore this scatter interactively →

Exploration