C12orf60

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C12orf60 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,653 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible C12orf60-associated proteins across cancer lineages are CKAP4_S26, PSME2_S10, and SRI. Each is linked with C12orf60 in more than 3 cancer types. Because this analysis shows association rather than direction, both C12orf60-to-partner and partner-to-C12orf60 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C12orf60 versus CKAP4_S26 in BRCA, with a Pearson correlation of -0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf60→partner) and Y-score (partner→C12orf60) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACKAP4_S26 →-0.760-0.469<.001<.00134
LUADPSME2_S10 →-0.653-0.315<.001<.00133
LUADSRI →+0.445+0.278<.001.00333
OVTPI1 →+0.422+0.439.002.00733
LUADNFIA →+0.314+0.274<.001<.00133
UCECPLEKHA5_S410 →+0.717+0.343<.001.00224
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,653 associations by consensus.

C12orf60 vs CKAP4_S26 — BRCA

Per-sample scatter of C12orf60 vs CKAP4_S26 in BRCA (Pearson r = -0.26).

Explore this scatter interactively →

Exploration