C12orf60

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, C12orf60 RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of C12orf60’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where C12orf60 RNA is repressed in tumor relative to normal tissue. In most cancer types C12orf60 is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

THCA, KICH, and HNSC are the cancer types where C12orf60 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in C12orf60 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleIV−0.876<.00111view →
KICHMaleAll−0.734<.0019view →
HNSCAllIII,IV+0.211.0019view →
COADMaleAll+0.307<.0016view →
LIHCMaleAll+0.411<.0015view →
LUADFemaleIII,IV−0.404<.0015view →
BRCAAllAll+0.218.0044view →
BLCAAllAll+0.226.0153view →
STADAllAll+0.226.0033view →
CHOLAllAll+0.866.0052view →
PRADAllAll+0.534<.0012view →
KIRPAllAll−0.364<.0012view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

C12orf60–THCA

Tumor-vs-normal expression box plot for C12orf60 RNA in THCA.

Open the THCA breakdown →

Exploration