C12orf54

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C12orf54 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,616 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C12orf54-associated proteins across cancer lineages are CNRIP1, ESD, and NID2. Each is linked with C12orf54 in more than 5 cancer types. Because this analysis shows association rather than direction, both C12orf54-to-partner and partner-to-C12orf54 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C12orf54 versus CNRIP1 in OV, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf54→partner) and Y-score (partner→C12orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCNRIP1 →+0.593+0.207.004.00826
OVESD →+0.478+0.279.001.00135
OVNID2 →+0.515+0.300.001.00134
GBMPSMD11 →-0.158-0.430<.001<.00134
GBMRFC1_S368 →-0.754-0.437<.001<.00134
BRCARRP36_S73 →-0.634-0.331<.001.00734
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,616 associations by consensus.

C12orf54 vs CNRIP1 — OV

Per-sample scatter of C12orf54 vs CNRIP1 in OV (Pearson r = 0.35).

Explore this scatter interactively →

Exploration