BANF2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BANF2 protein abundance is significantly associated with the RNA expression of many other genes, with 577 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible BANF2-associated genes across cancer lineages are GGT1, CCDC198, and EIF5. Each is linked with BANF2 in more than 1 cancer types. Because this analysis shows association rather than direction, both BANF2-to-partner and partner-to-BANF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BANF2 versus GGT1 in PDAC, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BANF2→partner) and Y-score (partner→BANF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACGGT1 →+0.499+0.777<.001.00231
PDACCCDC198 →+1.021+0.876<.001.00431
PDACEIF5 →-0.255-0.787.003.00731
PDACRAE1 →-0.202-0.795.008<.00131
PDACTCFL5 →-0.331-0.970.002<.00131
PDACGLRA2 →-0.092-0.856.006.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 577 associations by consensus.

BANF2 vs GGT1 — PDAC

Per-sample scatter of BANF2 vs GGT1 in PDAC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration