BAALC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BAALC protein abundance is significantly associated with the RNA expression of many other genes, with 2,545 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BAALC-associated genes across cancer lineages are BAALC-AS2, BAALC-AS1, and LINC01181. Each is linked with BAALC in more than 2 cancer types. Because this analysis shows association rather than direction, both BAALC-to-partner and partner-to-BAALC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BAALC versus BAALC-AS2 in LUAD, with a Pearson correlation of 0.86.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BAALC→partner) and Y-score (partner→BAALC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADBAALC-AS2 →+1.982+2.051.002<.00133
LSCCBAALC-AS1 →+1.036+1.474.002.00233
LSCCLINC01181 →+0.835+1.671.005<.00133
LUADCCNP →+0.954+1.142.002.00132
GBMB3GAT2 →+0.600+0.278.006.00732
LUADACSL3 →+0.638+1.465.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,545 associations by consensus.

BAALC vs BAALC-AS2 — LUAD

Per-sample scatter of BAALC vs BAALC-AS2 in LUAD (Pearson r = 0.86).

Explore this scatter interactively →

Exploration