B3GNT9

Across TCGA patient cohorts, B3GNT9 mutation is significantly associated with the RNA expression of many other genes, with 1,230 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible B3GNT9-associated genes across cancer lineages are RNU6-376P, CAPZBP1, and TAF7. Each is linked with B3GNT9 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT9-to-partner and partner-to-B3GNT9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-376P grouped by B3GNT9-low versus B3GNT9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT9→partner) and Y-score (partner→B3GNT9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNU6-376P →	+0.249	+3.132	<.001	.005	3	2
UCEC	CAPZBP1 →	+0.246	+2.077	.002	.007	3	2
UCEC	TAF7 →	+0.468	+3.459	.009	.005	3	1
UCEC	EDC3 →	+0.320	+2.343	.007	.003	3	1
UCEC	PCBP1-AS1 →	+0.411	+2.407	.001	.003	3	1
UCEC	CCDC43 →	+0.570	+2.354	.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,230 associations by consensus.

RNU6-376P by B3GNT9 expression — UCEC

Explore this box plot interactively →