B3GNT7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B3GNT7 mutation is significantly associated with the RNA expression of many other genes, with 1,065 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible B3GNT7-associated genes across cancer lineages are MIR6871, RN7SL720P, and RN7SL523P. Each is linked with B3GNT7 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT7-to-partner and partner-to-B3GNT7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6871 grouped by B3GNT7-low versus B3GNT7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT7→partner) and Y-score (partner→B3GNT7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6871 →+0.770+2.001<.001.00232
HNSCRN7SL720P →+0.167+5.953<.001<.00132
COADRN7SL523P →+0.421+4.893.002.00532
HNSCRNA5SP387 →+0.267+4.578<.001.00832
COADRNU6-619P →+0.652+4.790.004.00632
HNSCRNU6-933P →+0.363+4.245.008.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,065 associations by consensus.

MIR6871 by B3GNT7 expression — UCEC

Box plot of MIR6871 in B3GNT7-low vs B3GNT7-high samples in UCEC.

Explore this box plot interactively →

Exploration