B3GNT4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B3GNT4 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,415 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible B3GNT4-associated proteins across cancer lineages are XPO5, SCLY, and IL16. Each is linked with B3GNT4 in more than 4 cancer types. Because this analysis shows association rather than direction, both B3GNT4-to-partner and partner-to-B3GNT4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNT4 versus XPO5 in BRCA, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT4→partner) and Y-score (partner→B3GNT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAXPO5 →+0.443+0.410<.001<.00135
LUADSCLY →-0.475-0.461<.001<.00135
GBMIL16 →-0.494-0.313<.001.00235
BRCAKDM3A →+0.475+0.518<.001<.00135
BRCAMDM1_S601 →-0.629-0.367<.001.00735
LSCCARHGAP15_S64 →-0.660-0.537<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,415 associations by consensus.

B3GNT4 vs XPO5 — BRCA

Per-sample scatter of B3GNT4 vs XPO5 in BRCA (Pearson r = 0.33).

Explore this scatter interactively →

Exploration