AVP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AVP protein abundance is significantly associated with the RNA expression of many other genes, with 4,448 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible AVP-associated genes across cancer lineages are WFDC12, SPINK7, and OVOL1. Each is linked with AVP in more than 1 cancer types. Because this analysis shows association rather than direction, both AVP-to-partner and partner-to-AVP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AVP versus WFDC12 in HNSC, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AVP→partner) and Y-score (partner→AVP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCWFDC12 →+1.665+0.543<.001<.00132
HNSCSPINK7 →+2.516+0.799<.001<.00132
LSCCOVOL1 →+1.955+1.308<.001.00532
LSCCGRHL3-AS1 →+1.899+1.308<.001.00532
LSCCSPRR2F →+2.142+1.243.003.00932
HNSCCRYBB2P1 →-0.462-0.595.007<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,448 associations by consensus.

AVP vs WFDC12 — HNSC

Per-sample scatter of AVP vs WFDC12 in HNSC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration