ATP6V0A4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP6V0A4 protein abundance is significantly associated with the RNA expression of many other genes, with 5,584 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible ATP6V0A4-associated genes across cancer lineages are SVOPL, TMEM213, and RASAL1. Each is linked with ATP6V0A4 in more than 2 cancer types. Because this analysis shows association rather than direction, both ATP6V0A4-to-partner and partner-to-ATP6V0A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATP6V0A4 versus SVOPL in LSCC, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP6V0A4→partner) and Y-score (partner→ATP6V0A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSVOPL →+0.610+0.774<.001<.00133
LUADTMEM213 →+1.104+0.585<.001.00233
BRCARASAL1 →+1.098+0.805.001<.00132
BRCAKIAA1549 →+0.682+1.011<.001<.00132
LUADSETP12 →-0.416-0.624.003.00232
CCRCCMIR9-3HG →+1.170+0.496<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,584 associations by consensus.

ATP6V0A4 vs SVOPL — LSCC

Per-sample scatter of ATP6V0A4 vs SVOPL in LSCC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration