ATP2B2-IT2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP2B2-IT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,770 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATP2B2-IT2-associated proteins across cancer lineages are PLCB2, RAB32, and FARSA. Each is linked with ATP2B2-IT2 in more than 2 cancer types. Because this analysis shows association rather than direction, both ATP2B2-IT2-to-partner and partner-to-ATP2B2-IT2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP2B2-IT2→partner) and Y-score (partner→ATP2B2-IT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPLCB2 →-0.557-0.425<.001<.00132
GBMRAB32 →-0.447-0.448<.001<.00132
LSCCFARSA →+0.244+0.029<.001.00432
LSCCFARSB →+0.261+0.040.002.00632
GBMNCKAP1L →-0.598-0.452<.001<.00132
GBMNRBF2 →-0.484-0.426<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,770 associations by consensus.

Exploration