ATF4P4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATF4P4 mutation is significantly associated with the RNA expression of many other genes, with 2,885 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATF4P4-associated genes across cancer lineages are DCPS, DTL, and CDCA2. Each is linked with ATF4P4 in more than 2 cancer types. Because this analysis shows association rather than direction, both ATF4P4-to-partner and partner-to-ATF4P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DCPS grouped by ATF4P4-low versus ATF4P4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATF4P4→partner) and Y-score (partner→ATF4P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDCPS →+0.378+1.925.003.00433
UCECDTL →+0.550+2.431.002.00133
UCECCDCA2 →+0.687+2.169<.001<.00133
UCECCENPU →+0.513+1.925.004.00433
UCECDONSON →+0.451+2.534<.001<.00133
UCECSFXN1 →+0.480+2.485<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,885 associations by consensus.

DCPS by ATF4P4 expression — UCEC

Box plot of DCPS in ATF4P4-low vs ATF4P4-high samples in UCEC.

Explore this box plot interactively →

Exploration