ATAD2B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ATAD2B mutation is significantly associated with the RNA expression of many other genes, with 898 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ATAD2B-associated genes across cancer lineages are OR4D6, OR6K3, and KRTAP22-2. Each is linked with ATAD2B in more than 1 cancer types. Because this analysis shows association rather than direction, both ATAD2B-to-partner and partner-to-ATAD2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4D6 grouped by ATAD2B-low versus ATAD2B-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATAD2B→partner) and Y-score (partner→ATAD2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSOR4D6 →+0.013+4.906<.001.00631
OESOPHAGUSOR6K3 →+0.006+4.906<.001.00631
SKINKRTAP22-2 →+0.100+4.437<.001.00431
BLOOD_LeukemiaTAS2R7 →+0.013+3.185<.001.00631
BLOOD_LeukemiaCABS1 →+0.011+3.984<.001.00631
BLOOD_LeukemiaALPI →+0.003+3.464<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 898 associations by consensus.

OR4D6 by ATAD2B expression — OESOPHAGUS

Box plot of OR4D6 in ATAD2B-low vs ATAD2B-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration