ARVCF

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARVCF RNA expression is significantly associated with the protein abundance of many other proteins, with 14,012 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ARVCF-associated proteins across cancer lineages are ARVCF_S343, ARVCF_T642, and ARVCF_S335. Each is linked with ARVCF in more than 9 cancer types. Because this analysis shows association rather than direction, both ARVCF-to-partner and partner-to-ARVCF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARVCF versus ARVCF_S343 in UCEC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ARVCF→partner) and Y-score (partner→ARVCF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECARVCF_S343 →+0.846+1.322<.001<.001310
OVARVCF_T642 →+1.135+1.065.002<.00128
CCRCCARVCF_S335 →+0.736+0.832<.001<.00136
LSCCARHGEF1 →-0.241-0.806<.001<.00135
CCRCCPYCARD →-0.566-0.706<.001<.00135
BRCAARVCF_S267 →+0.807+0.766<.001.00626
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,012 associations by consensus.

ARVCF vs ARVCF_S343 — UCEC

Per-sample scatter of ARVCF vs ARVCF_S343 in UCEC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration