ARHGDIA

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGDIA mutation is significantly associated with the RNA expression of many other genes, with 263 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARHGDIA-associated genes across cancer lineages are CYCSP49, RN7SL712P, and MIR4510. Each is linked with ARHGDIA in more than 1 cancer types. Because this analysis shows association rather than direction, both ARHGDIA-to-partner and partner-to-ARHGDIA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CYCSP49 grouped by ARHGDIA-low versus ARHGDIA-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGDIA→partner) and Y-score (partner→ARHGDIA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCACYCSP49 →+0.496+3.527<.001.00732
HNSCRN7SL712P →+0.216+6.008<.001.00232
CESCMIR4510 →+0.300+5.342<.001.00232
UCECANAPC15P1 →+0.178+2.283.001.00532
UCECRNU7-188P →+0.284+4.010<.001.00732
CESCIGHD6-13 →+1.461+4.816<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 263 associations by consensus.

CYCSP49 by ARHGDIA expression — BLCA

Box plot of CYCSP49 in ARHGDIA-low vs ARHGDIA-high samples in BLCA.

Explore this box plot interactively →

Exploration