ARHGAP18

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGAP18 mutation is significantly associated with the RNA expression of many other genes, with 3,493 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARHGAP18-associated genes across cancer lineages are H3P20, RNU4-58P, and TRAJ21. Each is linked with ARHGAP18 in more than 2 cancer types. Because this analysis shows association rather than direction, both ARHGAP18-to-partner and partner-to-ARHGAP18 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, H3P20 grouped by ARHGAP18-low versus ARHGAP18-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP18→partner) and Y-score (partner→ARHGAP18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCH3P20 →+0.142+5.368.003.00533
UCECRNU4-58P →+0.164+2.396.001.00133
BLCATRAJ21 →+0.602+4.497<.001.00933
READOR6K5P →+0.057+6.257<.001.00132
HNSCKRTAP27-1 →+0.093+5.368<.001.00532
HNSCMIR516A1 →+0.573+5.303<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,493 associations by consensus.

H3P20 by ARHGAP18 expression — HNSC

Box plot of H3P20 in ARHGAP18-low vs ARHGAP18-high samples in HNSC.

Explore this box plot interactively →

Exploration