ALKBH7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ALKBH7 mutation is significantly associated with the RNA expression of many other genes, with 43 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ALKBH7-associated genes across cancer lineages are RN7SL301P, MIR6780B, and WBP1LP6. Each is linked with ALKBH7 in more than 1 cancer types. Because this analysis shows association rather than direction, both ALKBH7-to-partner and partner-to-ALKBH7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL301P grouped by ALKBH7-low versus ALKBH7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ALKBH7→partner) and Y-score (partner→ALKBH7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL301P →+0.295+3.546<.001<.00131
UCECMIR6780B →+0.537+3.567<.001.00131
UCECWBP1LP6 →+0.112+4.437<.001.00531
SKCMIQCF5-AS1 →+0.024+5.362<.001.00531
SKCMRN7SKP210 →+0.378+6.080<.001.00231
SKCMOR7E129P →+0.069+5.224<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 43 associations by consensus.

RN7SL301P by ALKBH7 expression — UCEC

Box plot of RN7SL301P in ALKBH7-low vs ALKBH7-high samples in UCEC.

Explore this box plot interactively →

Exploration