ACVR1B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ACVR1B mutation is significantly associated with the RNA expression of many other genes, with 2,808 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ACVR1B-associated genes across cancer lineages are GMEB1, TYMS, and RAD51. Each is linked with ACVR1B in more than 2 cancer types. Because this analysis shows association rather than direction, both ACVR1B-to-partner and partner-to-ACVR1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GMEB1 grouped by ACVR1B-low versus ACVR1B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ACVR1B→partner) and Y-score (partner→ACVR1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGMEB1 →+0.248+1.773.004.00133
UCECTYMS →+0.484+1.253.007.00633
UCECRAD51 →+0.568+1.595<.001<.00133
UCECTIPIN →+0.388+1.980<.001<.00133
UCECCDCA2 →+0.601+2.269<.001<.00133
BRCAFAM30B →+0.229+4.453<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,808 associations by consensus.

GMEB1 by ACVR1B expression — UCEC

Box plot of GMEB1 in ACVR1B-low vs ACVR1B-high samples in UCEC.

Explore this box plot interactively →

Exploration