ACTA2-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ACTA2-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 23,406 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ACTA2-AS1-associated proteins across cancer lineages are LMCD1, LMCD1_S16, and LMOD1. Each is linked with ACTA2-AS1 in more than 9 cancer types. Because this analysis shows association rather than direction, both ACTA2-AS1-to-partner and partner-to-ACTA2-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ACTA2-AS1 versus LMCD1 in OV, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ACTA2-AS1→partner) and Y-score (partner→ACTA2-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVLMCD1 →+0.690+1.191<.001<.001310
PDACLMCD1_S16 →+1.090+0.794<.001<.001310
UCECLMOD1 →+1.070+1.438<.001<.001310
UCECLMOD1_S85 →+1.260+1.347<.001<.001310
BRCAMSRB3 →+0.979+1.610<.001<.001310
UCECMYLK →+0.858+1.271<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,406 associations by consensus.

ACTA2-AS1 vs LMCD1 — OV

Per-sample scatter of ACTA2-AS1 vs LMCD1 in OV (Pearson r = 0.54).

Explore this scatter interactively →

Exploration