ABCA9

Across TCGA patient cohorts, ABCA9 RNA expression is significantly associated with the protein abundance of many other proteins, with 22,462 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ABCA9-associated proteins across cancer lineages are SYNPO2, DCN, and TNXB. Each is linked with ABCA9 in more than 9 cancer types. Because this analysis shows association rather than direction, both ABCA9-to-partner and partner-to-ABCA9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABCA9 versus SYNPO2 in CCRCC, with a Pearson correlation of 0.56.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA9→partner) and Y-score (partner→ABCA9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	SYNPO2 →	+0.825	+0.714	<.001	<.001	3	10
CCRCC	DCN →	+0.966	+0.809	<.001	<.001	3	10
UCEC	TNXB →	+0.914	+0.924	<.001	<.001	3	10
COAD	OGN →	+1.361	+0.631	<.001	<.001	3	10
BRCA	PODN →	+0.787	+1.233	<.001	<.001	3	9
UCEC	PRELP →	+1.011	+1.063	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 22,462 associations by consensus.

ABCA9 vs SYNPO2 — CCRCC

Explore this scatter interactively →