ABCA17P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABCA17P RNA expression is significantly associated with the protein abundance of many other proteins, with 8,920 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ABCA17P-associated proteins across cancer lineages are SBF1, SART3, and HCFC1. Each is linked with ABCA17P in more than 3 cancer types. Because this analysis shows association rather than direction, both ABCA17P-to-partner and partner-to-ABCA17P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABCA17P versus SBF1 in OV, with a Pearson correlation of -0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA17P→partner) and Y-score (partner→ABCA17P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSBF1 →-0.321-0.591<.001<.00134
OVSART3 →+0.279+0.510.001.00233
HNSCHCFC1 →+0.237+0.819<.001<.00133
HNSCIRS2_S608 →+0.934+0.748<.001.00433
HNSCITPRID2 →-0.508-0.658<.001<.00133
OVLIN9 →+0.297+0.577.006.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,920 associations by consensus.

ABCA17P vs SBF1 — OV

Per-sample scatter of ABCA17P vs SBF1 in OV (Pearson r = -0.45).

Explore this scatter interactively →

Exploration