ABCA17P

Across TCGA patient cohorts, ABCA17P mutation is significantly associated with the RNA expression of many other genes, with 2,027 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ABCA17P-associated genes across cancer lineages are SNRPD3, PPM1F, and CRYBB2P1. Each is linked with ABCA17P in more than 1 cancer types. Because this analysis shows association rather than direction, both ABCA17P-to-partner and partner-to-ABCA17P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRPD3 grouped by ABCA17P-low versus ABCA17P-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA17P→partner) and Y-score (partner→ABCA17P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SNRPD3 →	+0.458	+3.087	<.001	<.001	3	1
UCEC	PPM1F →	+0.347	+1.939	.007	.009	3	1
UCEC	CRYBB2P1 →	+0.489	+2.436	.002	.002	3	1
UCEC	CCDC134 →	+0.760	+3.108	<.001	<.001	3	1
UCEC	CENPM →	+0.572	+3.087	.008	<.001	3	1
UCEC	RHBDD3 →	+0.494	+2.415	.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,027 associations by consensus.

SNRPD3 by ABCA17P expression — UCEC

Explore this box plot interactively →