Positive regulation of miRNA metabolic process

pathway activity — cross-omics
GO:2000630Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of miRNA metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SERPINA4, SERPING1, and C1S, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of miRNA metabolic process activity versus SERPINA4 in BRCA (Pearson r = 0.28).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASERPINA4 →+0.545+0.031<.001<.00136
BRCASERPING1 →+0.516+0.029<.001<.00136
BRCAC1S →+0.617+0.050<.001<.00136
BRCAC8B →+0.381+0.031<.001<.00136
BRCAITIH1 →+0.458+0.026<.001<.00136
CCRCCLAMA4 →+0.397+0.038<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000630 vs SERPINA4 — BRCA

Per-sample scatter of Positive regulation of miRNA metabolic process activity vs SERPINA4 in BRCA.

Explore this scatter interactively →

Exploration