Positive regulation of lamellipodium morphogenesis

pathway activity — cross-omics
GO:2000394Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of lamellipodium morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CORO1C, FOSL1, and AIP, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of lamellipodium morphogenesis activity versus CORO1C in LUNG_NSCLC_LUAD (Pearson r = 0.50).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADCORO1C →+1.100+0.815<.001.00135
LUNG_NSCLC_LUADFOSL1 →+2.869+0.682<.001<.00135
BONEAIP →+1.663+0.501<.001<.00135
SKINPHLDA1 →+1.349+0.610<.001.00634
LUNG_NSCLC_LUADDUSP16 →-0.676-0.510.006.00134
LUNG_NSCLC_LUADSMIM29 →+0.796+0.450.001.00934
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000394 vs CORO1C — LUNG_NSCLC_LUAD

Per-sample scatter of Positive regulation of lamellipodium morphogenesis activity vs CORO1C in LUNG_NSCLC_LUAD.

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Exploration