Negative regulation of non-canonical Wnt signaling pathway

pathway activity — cross-omics
GO:2000051Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of non-canonical Wnt signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SFRP4, LHFPL6, and PODN, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSFRP4 →+2.470+0.352<.001.00337
BRCALHFPL6 →+1.113+0.189<.001<.00136
OVPODN →+1.583+0.294<.001.00236
OVSYDE1 →+0.749+0.270.004.00736
OVADAMTS10 →+0.840+0.235<.001<.00136
UCECHAND2 →+1.014+0.515<.001.00636
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration