Response to sodium phosphate

pathway activity — cross-omics
GO:1904383Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Response to sodium phosphate pathway is significantly associated with the RNA expression of multiple genes, with the PANCREAS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FEM1A, HLA-F, and NRDE2, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, FEM1A grouped by Response to sodium phosphate-low versus -high activity in PANCREAS.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASFEM1A →-0.400-1.311.003<.00134
OVARYHLA-F →+2.220+1.146.002.00134
SOFT_TISSUENRDE2 →-0.869-1.495.002<.00134
OVARYANAPC15 →+0.785+1.029.002.00534
OVARYUAP1 →+1.240+1.240<.001<.00134
BLOOD_LeukemiaZNF92 →+0.965+1.151.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

FEM1A by Response to sodium phosphate activity — PANCREAS

Box plot of FEM1A in Response to sodium phosphate-low vs -high samples in PANCREAS.

Explore this box plot interactively →

Exploration