Negative regulation of p38MAPK cascade

pathway activity — cross-omics
GO:1903753Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Negative regulation of p38MAPK cascade pathway is significantly associated with the RNA expression of multiple genes, with the OESOPHAGUS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are KRT6A, COL17A1, and PKP1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of p38MAPK cascade activity versus KRT6A in OESOPHAGUS (Pearson r = 0.65).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSKRT6A →+5.978+0.318.005<.00133
OESOPHAGUSCOL17A1 →+3.641+0.282.003.00233
OESOPHAGUSPKP1 →+4.788+0.367<.001.00233
UPPER_AERODIGESTIVE_TRACTERI1 →-1.076-0.355.004<.00133
UPPER_AERODIGESTIVE_TRACTMCM7 →-1.432-0.308.002<.00133
UPPER_AERODIGESTIVE_TRACTHSPA4 →-1.289-0.347.008.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903753 vs KRT6A — OESOPHAGUS

Per-sample scatter of Negative regulation of p38MAPK cascade activity vs KRT6A in OESOPHAGUS.

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Exploration