Positive regulation of neutrophil migration

pathway activity — cross-omics
GO:1902624Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of neutrophil migration pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GPR63, PNRC2, and MPND, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, GPR63 grouped by Positive regulation of neutrophil migration-low versus -high activity in LUNG_NSCLC_LUAD.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADGPR63 →-0.500-0.937.005<.00134
SOFT_TISSUEPNRC2 →-0.777-1.520.007<.00134
SOFT_TISSUEMPND →-0.697-0.975.001.00534
LIVERPSMD10 →+1.001+1.439.001.00333
LIVERCISD1 →+0.771+1.680.001<.00133
SOFT_TISSUECOMMD3 →+1.352+1.260.006.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GPR63 by Positive regulation of neutrophil migration activity — LUNG_NSCLC_LUAD

Box plot of GPR63 in Positive regulation of neutrophil migration-low vs -high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration