Regulation of extrinsic apoptotic signaling pathway via death domain receptors

pathway activity — cross-omics
GO:1902041Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of extrinsic apoptotic signaling pathway via death domain receptors pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MMP19, PELATON, and VIM, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of extrinsic apoptotic signaling pathway via death domain receptors activity versus MMP19 in GBM (Pearson r = 0.25).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMMP19 →+1.036+0.195.002.00236
COADPELATON →+0.643+0.747<.001<.00136
COADVIM →+0.951+0.932<.001<.00136
COADFCGR2A →+0.657+0.683.002<.00135
COADANKRD1 →+0.393+0.530.005.00235
COADSERPING1 →+1.211+0.829<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1902041 vs MMP19 — GBM

Per-sample scatter of Regulation of extrinsic apoptotic signaling pathway via death domain receptors activity vs MMP19 in GBM.

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Exploration