Negative regulation of cellular response to oxidative stress

pathway activity — cross-omics
GO:1900408Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of cellular response to oxidative stress pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PPL, CHMP1A, and CIAPIN1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPPL →+0.620+0.060<.001<.00136
BRCACHMP1A →+0.380+0.055<.001<.00136
BRCACIAPIN1 →+0.274+0.040<.001.00435
BRCAMEAK7 →+0.592+0.074<.001<.00135
BRCARANBP10 →+0.199+0.033<.001.00835
LUADCOQ9 →+0.315+0.063.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration