Intracellular nitrogen homeostasis

pathway activity — cross-omics
GO:0141067Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Intracellular nitrogen homeostasis pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are QPCTL, ASTN2, and STAC, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAQPCTL →+0.425+0.079<.001.00334
BRCAASTN2 →+0.623+0.078.006.00234
OVSTAC →-1.333-0.097<.001<.00133
OVPPP1CC →-0.518-0.114.001<.00133
OVPHGR1 →+0.097+0.128.002<.00133
OVST6GALNAC4P1 →+0.485+0.085<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration