Lipid droplet formation

pathway activity — cross-omics
GO:0140042Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Lipid droplet formation pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CASC15, RPL7, and CEP152, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Lipid droplet formation activity versus CASC15 in OV (Pearson r = -0.26).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCASC15 →-0.397-0.256<.001.00235
LUADRPL7 →-0.376-0.321<.001.00334
UCECCEP152 →-0.544-0.695<.001<.00134
GBMMDFI →-0.951-0.279.002.00634
GBMCHTF18 →-0.483-0.260<.001.00134
LSCCMTHFD1L →-0.272-0.330.008<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0140042 vs CASC15 — OV

Per-sample scatter of Lipid droplet formation activity vs CASC15 in OV.

Explore this scatter interactively →

Exploration