Cell-substrate junction disassembly

pathway activity — cross-omics
GO:0120180Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cell-substrate junction disassembly pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MAPRE2, ELMO1, and LRCH2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMAPRE2 →+0.580+0.597<.001<.00136
GBMELMO1 →+0.581+0.470<.001<.00135
LSCCLRCH2 →+0.486+0.499.009.00935
CCRCCTMEM204 →+1.183+0.748<.001.00135
HNSCROBO4 →+0.517+0.552.007.00835
CCRCCEBF1 →+0.813+0.683.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration