Keratinocyte apoptotic process

pathway activity — cross-omics
GO:0097283Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Keratinocyte apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are VCL, CNN3_S323, and ISLR, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADVCL →+0.361+0.041<.001<.00138
OVCNN3_S323 →+0.664+0.052.001.00338
COADISLR →+0.667+0.076<.001<.00138
BRCASEPTIN11 →+0.316+0.043<.001<.00137
OVSFRP4 →+1.156+0.061<.001<.00137
UCECCALD1 →+0.699+0.061.003<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration