Keratinocyte apoptotic process

pathway activity — cross-omics
GO:0097283Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Keratinocyte apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MMP19, IL6, and CCDC71L, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMMP19 →+1.464+0.653<.001<.00135
OVIL6 →+0.731+0.352.003.00135
OVCCDC71L →+0.517+0.367<.001.00135
GBMCAVIN1 →+0.679+0.459<.001.00235
UCECCCN1 →+1.007+0.349.001.00635
CCRCCGLT8D2 →+0.749+0.713<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration