Renal tubular secretion

pathway activity — cross-omics
GO:0097254Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Renal tubular secretion pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are KNG1, PLVAP, and ASPA, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Renal tubular secretion activity versus KNG1 in BRCA (Pearson r = 0.13).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAKNG1 →+0.454+0.050.007.00137
CCRCCPLVAP →+0.506+0.109<.001<.00137
BRCAASPA →+0.648+0.050<.001.00236
LSCCSPTBN1_S257 →+0.580+0.069<.001<.00136
BRCATPM1 →+0.548+0.058<.001<.00136
BRCAWDR43 →-0.312-0.052<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0097254 vs KNG1 — BRCA

Per-sample scatter of Renal tubular secretion activity vs KNG1 in BRCA.

Explore this scatter interactively →

Exploration