Type B pancreatic cell apoptotic process

pathway activity — cross-omics
GO:0097050Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Type B pancreatic cell apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CAST, PLPBP, and PM20D2, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCAST →+0.458+0.278.002<.00134
OVPLPBP →-0.400-0.164.003.00134
BRCAPM20D2 →-1.140-0.208.001.00134
LSCCRNU7-8P →-0.305-0.406.004.00933
UCECMRPS31 →-0.356-0.091.004.00533
UCECCCDC150 →-0.587-0.111.004<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration