Negative regulation of cell migration involved in sprouting angiogenesis

pathway activity — cross-omics
GO:0090051Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of cell migration involved in sprouting angiogenesis pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RHOJ, TNFSF12, and SRPX, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of cell migration involved in sprouting angiogenesis activity versus RHOJ in HNSC (Pearson r = 0.16).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRHOJ →+0.706+0.247<.001<.00137
HNSCTNFSF12 →+0.535+0.152.001.00437
GBMSRPX →+1.101+0.704<.001<.00135
BRCASTARD13 →+0.612+0.568<.001<.00135
LUADLINC00324 →+0.297+0.807.001.00335
GBMFBXO32 →+1.321+0.891<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0090051 vs RHOJ — HNSC

Per-sample scatter of Negative regulation of cell migration involved in sprouting angiogenesis activity vs RHOJ in HNSC.

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Exploration