Membrane depolarization during AV node cell action potential

Across TCGA patient cohorts, RNA activity of the Membrane depolarization during AV node cell action potential pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CPSF3, ATG4B_S383, and TNS1_S1177, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Membrane depolarization during AV node cell action potential activity versus CPSF3 in BRCA (Pearson r = -0.42).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CPSF3 →	-0.310	-0.264	<.001	.001	3	4
UCEC	ATG4B_S383 →	-0.627	-0.403	.001	<.001	3	3
LSCC	TNS1_S1177 →	-1.316	-0.993	<.001	<.001	3	3
LUAD	BMX_S254 →	+0.654	+0.408	<.001	<.001	3	3
OV	NAA80 →	-0.831	-0.475	<.001	<.001	3	3
OV	PDCD4_T93 →	+1.090	+0.568	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0086045 vs CPSF3 — BRCA

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