Protein localization to cell cortex

pathway activity — cross-omics
GO:0072697Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Protein localization to cell cortex pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TNXB, COG7_S506, and EPB41L2_S715, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTNXB →+0.746+0.530<.001<.00133
GBMCOG7_S506 →-0.515-0.226<.001<.00133
OVEPB41L2_S715 →+0.995+0.600<.001.00124
PDACSLC9A3R1_S280 →+1.182+0.233.001<.00133
OVTAF9B →+0.607+0.591.001<.00133
BRCAGART_S802 →+0.613+0.524<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration