Positive regulation of monocyte chemotactic protein-1 production

pathway activity — cross-omics
GO:0071639Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of monocyte chemotactic protein-1 production pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SAMSN1_S23, SASH3_S38, and SERPINB9, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of monocyte chemotactic protein-1 production activity versus SAMSN1_S23 in BRCA (Pearson r = 0.48).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASAMSN1_S23 →+0.641+0.042.002.003310
HNSCSASH3_S38 →+0.763+0.073<.001<.001310
UCECSERPINB9 →+0.641+0.085<.001<.001310
UCECSKAP2 →+0.863+0.108<.001<.001310
OVSPN →+0.844+0.076<.001<.001310
OVSPN_S355 →+0.952+0.052.003.001310
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071639 vs SAMSN1_S23 — BRCA

Per-sample scatter of Positive regulation of monocyte chemotactic protein-1 production activity vs SAMSN1_S23 in BRCA.

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Exploration