IP-10 production

pathway activity — cross-omics
GO:0071612Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the IP-10 production pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CXCR3, IL2RB, and KIR2DL4, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCXCR3 →+0.438+0.167.007.00434
UCECIL2RB →+0.813+0.345<.001.00233
LUADKIR2DL4 →+0.444+0.176.002.00624
LUADCYCSP6 →+1.661+0.183.004.00433
LUADC5orf58 →+0.377+0.223.004.00733
OVSLC2A5 →+0.799+0.333.006.00533
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration