Cellular response to X-ray

pathway activity — cross-omics
GO:0071481Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular response to X-ray pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FKBP7, THBS3, and TIMP2, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cellular response to X-ray activity versus FKBP7 in OV (Pearson r = 0.29).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFKBP7 →+0.624+0.069<.001<.00139
UCECTHBS3 →+0.676+0.144<.001<.00138
OVTIMP2 →+0.645+0.083<.001<.00138
OVVIM →+0.517+0.092<.001<.00138
HNSCCACNA2D1 →+0.749+0.091<.001<.00138
PDACCNPY4 →+0.358+0.089<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071481 vs FKBP7 — OV

Per-sample scatter of Cellular response to X-ray activity vs FKBP7 in OV.

Explore this scatter interactively →

Exploration