Cellular response to estrogen stimulus

Across TCGA cell cohorts, RNA activity of the Cellular response to estrogen stimulus pathway is significantly associated with the RNA expression of multiple genes, with the SKIN cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FDXR, SPATA21, and TRABD2B, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, FDXR grouped by Cellular response to estrogen stimulus-low versus -high activity in SKIN.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	FDXR →	+0.995	+0.214	<.001	<.001	3	4
OESOPHAGUS	SPATA21 →	-0.284	-0.944	<.001	.006	3	3
KIDNEY	TRABD2B →	+1.563	+0.423	<.001	<.001	3	3
STOMACH	SF3B6 →	-0.773	-0.362	.004	.003	3	3
STOMACH	ALMS1 →	-1.020	-0.437	.004	.003	3	3
STOMACH	RPS27L →	+1.257	+0.380	.003	.002	2	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

FDXR by Cellular response to estrogen stimulus activity — SKIN

Explore this box plot interactively →